John,
When you run the setup command, either every single module you want to
include should be specified in the Modules file which sits under your
FLASH home directory, or you should specify a -auto option in the setup
command line. In the first case setup script does not try to generate a
list of modules included from the Config files, and the second case it
does. So you can either modify your Modules file and replace the line
INCLUDE mesh/amr/paramesh2.0/quadratic_cartesian
with
INCLUDE mesh/amr/paramesh2.0/quadratic_cartesian
and issue the setup command as you did, or add -auto option to your setup
command.
Anshu
On Tue, 17 Jan 2006, John Cannizzo wrote:
>
>
>
> Hi--
>
>
> OK I edited that file so that now it looks like this:
>
>
>
> [cannizzo@thunder1 rhd_jet]$ cat setups/rhd_jet/Config
>
> # Configuration file for the Relativistic Jet problem
>
> REQUIRES driver
> REQUIRES hydro/rhd
> REQUIRES materials/eos/rhdgamma
> REQUIRES mesh/amr/paramesh2.0/quadratic_cylindrical OR
> mesh/amr/paramesh2.0/monotonic
>
>
>
>
>
>
>
>
>
> and this is the error I now get with setup:
>
> [cannizzo@thunder1 FLASH2.5]$ ./setup rhd_jet -2d -maxblocks=5000
> checking for needed files and directories
> checking sites Aliases file
> using site directory for site thunder1
> removing old links in build directory object
> scanning /home/cannizzo/FLASH2.5/Modules file for included modules
> database/amr/paramesh2.0
> driver/time_dep
> gravity/null
> hydro/rhd
> io/amr/hdf5_serial
> materials/eos/rhdgamma
> mesh/amr/paramesh2.0/quadratic_cartesian
> util/tools
> util/wrapping
> checking for default sub-modules in included modules
> checking that no mutually exclusive sub-modules are included together
> looking for paths of non-included modules
> checking requirements
> ../setups/rhd_jet REQUIRES 'mesh/amr/paramesh2.0/quadratic_cylindrical' OR
> 'mesh/amr/paramesh2.0/monotonic', not included
>
>
>
>
>
>
>
>
> It looks like the "quadratic_cylindrical" is in the paramesh2.0
> directory:
>
> [cannizzo@thunder1 FLASH2.5]$ ls source/mesh/amr/paramesh2.0/
> Config amr_guardcell_srl.F90
> amr_restrict_edge_data.F90
> Makefile amr_initialize.F90
> amr_restrict_fc.F90
> amr_bc_set.F90 amr_mark_edges.F90
> amr_restrict_fc_fun.F90
> amr_bsort.F90 amr_morton.F90
> amr_restrict_red.F90
> amr_close.F90 amr_morton.F90~
> amr_restrict_unk_fun.F90
> amr_cp_loc.F90 amr_prolong.F90
> amr_restrict_unk_fun_recip.F90
> amr_cp_remote.F90 amr_prolong_cc.F90
> amr_restrict_work_fun.F90
> amr_derefine_blocks.F90 amr_prolong_cc.F90~
> amr_restrict_work_fun_recip.F90
> amr_diagonal_patch.F90 amr_prolong_cc_fun_init.F90
> amr_shmem_lib_1proc.F90
> amr_edge_average.F90 amr_prolong_face_fun.F90
> amr_shmem_reduce.F90
> amr_edge_average_udt.F90 amr_prolong_face_fun_init.F90 injection
> amr_edge_average_vdt.F90 amr_prolong_fc.F90
> mesh_interface.F90
> amr_edge_diagonal_check.F90 amr_prolong_fc_divbconsist.F90
> quadratic_cartesian
> amr_empty_grid_blocks.F90 amr_prolong_fun_init.F90
> quadratic_cylindrical
> amr_face_cp_loc.F90 amr_prolong_gen_face_fun.F90
> quadratic_polar
> amr_face_cp_remote.F90 amr_redist_blk.F90
> quadratic_spherical
> amr_flux_conserve.F90 amr_redist_blk_blocking
> ref_marking.F90
> amr_flux_conserve_udt.F90 amr_redist_blk_new
> second_order_old
> amr_flux_conserve_vdt.F90 amr_refine_blocks.F90 shmem.fh
> amr_guardcell.F90 amr_refine_derefine.F90
> shmem_reduce.fh
> amr_guardcell.F90~ amr_refine_derefine.F90~ timer.fh
> amr_guardcell_c_to_f.F90 amr_restrict.F90 tot_bnd.F90
> amr_guardcell_cc_c_to_f.F90 amr_restrict_bnd_data.F90 tracer.fh
> amr_guardcell_cc_srl.F90 amr_restrict_cc.F90 user_bnd.F90
> amr_guardcell_fc_c_to_f.F90 amr_restrict_eblock_marker.F90
> amr_guardcell_fc_srl.F90 amr_restrict_edge.F90
>
>
>
>
>
>
>
>
>
> On Tue, 17 Jan 2006, Tomasz Plewa wrote:
>
> > This is because your setup REQUIRES one of those two interpolation
> > methods. Please edit and modify
> >
> > setups/rhd_jet/Config
> >
> > file as necessary.
> >
> > Hope this helps.
> >
> > Tomek
>
Received on Tue Jan 17 10:33:56 2006
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